[Gofriends] April 2008 GOA release
Daniel Barrell
dbarrell at ebi.ac.uk
Wed Apr 2 09:03:23 PDT 2008
GOA releases: April 2008
============================
GOA (GO Annotation at EBI) is a project run by the European Bioinformatics
Institute that aims to provide assignments of gene products to the Gene
Ontology (GO) resource.
The data can be obtained via:
EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/
EBI SRS: http://srs.ebi.ac.uk. Search GOA data library
GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/
GO CVS: http://www.geneontology.org/GO.CVS.help.html
(the last two will be updated overnight)
For further information read: http://www.ebi.ac.uk/GOA or contact
goa at ebi.ac.uk.
The GOA group has started to produce, in collaboration with the British
Heart Foundation-funded Cardiovascular Gene Ontology Annotation
Initiative, a BHF-UCL gene association file, which contains all GO
annotations for 4,027 human proteins implicated in cardiovascular
development or disease. The BHF-UCL file is a sub-set of the UniProt
gene association file, and will provide the cardiovascular community
with a discrete set of relevant GO annotations. This file will be
updated by GOA monthly and can be downloaded from:
ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/bhf-ucl/gene_association.goa_bhf-ucl.gz
The University College London based Gene Ontology Annotation Initiative
aims to prioritise the manual annotation of genes associated with the
cardiovascular system, for further information on this project, please see:
http://www.ucl.ac.uk/medicine/cardiovascular-genetics/geneontology.html
http://wiki.geneontology.org/index.php/Cardiovascular_Gene_Page
Regards
The UniProt GOA Team
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