[Gofriends] Question

[Holmes, Kristi]

Hello,



PIR (Protein Information Resource) provides a tool called ID Mapping, which is capable of converting lists of IDs (like GenBank AC, gi, RefSeq, TIGR, Pfam, Prints, PROSITE, KEGG pathway ID, GO, BIND, Gene name, Entrez Gene ID, OMIM, PubMed, and more) to and from UniProtKB ID or a number of other ID types. It has been a while since I've visited the site, but I doubt that much has changed since then.



PIR ID Mapping tool:

http://pir.georgetown.edu/pirwww/search/idmapping.shtml



PIR Help document for ID Mapping:

http://pir.georgetown.edu/pirwww/support/help.shtml#27







Hope this helps,

Kristi



________________________________________________



Kristi L. Holmes, Ph.D.

Bioinformaticist

The Bernard Becker Medical Library

Washington University in St. Louis School of Medicine

Campus Box 8132 ~ 660 S. Euclid Avenue

St. Louis, MO 63110-1093

Tel: (314) 362-4737

Fax: (314) 454-6606

holmeskr at wustl.edu

http://becker.wustl.edu/resources/bioinfo/index.php







-----Original Message-----

From: gofriends-bounces at genome.stanford.edu [mailto:gofriends-bounces at genome.stanford.edu] On Behalf Of Paul Sternberg

Sent: Wednesday, May 14, 2008 7:43 PM

To: Milagros Perez

Cc: gofriends at genome.stanford.edu

Subject: Re: [Gofriends] Question



Milagros,

What sort of genes?  If they are worm genes, then wormmart; if they

are mouse genes, MGI.... etc. etc.

Paul



On May 14, 2008, at 12:13 PM, Milagros Perez wrote:



> I was hoping someone could help me with this:

>

> If I have a list of genes, is there any way to get their respective

> swissprot IDs without having to do it manually? Does anyone know of

> a website or software that offers that service?

>

> Thank you,

>

> Milagros Perez

> _______________________________________________

> Gofriends mailing list

> Gofriends at geneontology.org

> http://fafner.stanford.edu/mailman/listinfo/gofriends



Paul Sternberg

pws at caltech.edu







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