[Gofriends] Fw: Question

[Suzanna Lewis]

Just out of curiosity. Has anyone compared the answers that these  
various tools provide? Presumably (given organism constraints) they  
should be consistent, but has this been checked?

-S

On May 15, 2008, at 4:05 AM, Judith Blake wrote:

> Dear Sudhindra,
>
> Yes MGI gives SwissProt IDs (now UniProtKB IDs)
>
> each gene report provides the UniProtKB ID for the representative  
> protein for that gene.
>
> In addition, there is a nightly-refreshed ftp report that provides  
> this information
>
> it can be found here:
> ftp://ftp.informatics.jax.org/pub/reports/MRK_SwissProt_TrEMBL.rpt
>
> details about ftp reports provided by MGI are here
> ftp://ftp.informatics.jax.org/pub/reports/index.html
>
> I hope this information is useful to you.
>
> Judy
>
>
> Sudhindra.Gadagkar at notes.udayton.edu wrote:
>>
>> Does MGI give Swissprot IDs?
>> Sudhindra Gadagkar
>>
>> ----------------------------------------------------------------------------
>> Sudhindra R. Gadagkar, Ph.D.
>> Department of Biology
>> University of Dayton
>> 300 College Park
>> Dayton, OH 45469-2320
>>
>> Ph: (937) 229-2410
>> Fax: (937) 229-2021
>> Email: gadagkar at notes.udayton.edu
>> ----------------------------------------------------------------------------
>>
>> "The aim of science is not to open the door to infinite wisdom, but  
>> to set a limit to infinite error."
>> - Bertolt Brecht, Life of Galileo
>>
>>
>>
>>
>> ----- Forwarded by Sudhindra _ Gadagkar/A&S/FacStaff/UDayton on  
>> 05/14/2008 10:48 PM -----
>> *Paul Sternberg <pws at caltech.edu>*
>> Sent by: gofriends-bounces at genome.stanford.edu
>>
>> 05/14/2008 08:43 PM
>>
>> 	
>> To
>> 	Milagros Perez <miperez at vbi.vt.edu>
>> cc
>> 	gofriends at genome.stanford.edu
>> Subject
>> 	Re: [Gofriends] Question
>>
>>
>>
>> 	
>>
>>
>>
>>
>>
>> Milagros,
>> What sort of genes?  If they are worm genes, then wormmart; if  
>> they  are mouse genes, MGI.... etc. etc.
>> Paul
>>
>> On May 14, 2008, at 12:13 PM, Milagros Perez wrote:
>>
>> > I was hoping someone could help me with this:
>> >
>> > If I have a list of genes, is there any way to get their  
>> respective  > swissprot IDs without having to do it manually? Does  
>> anyone know of  > a website or software that offers that service?
>> >
>> > Thank you,
>> >
>> > Milagros Perez
>> > _______________________________________________
>> > Gofriends mailing list
>> > Gofriends at geneontology.org
>> > http://fafner.stanford.edu/mailman/listinfo/gofriends
>>
>> Paul Sternberg
>> pws at caltech.edu
>>
>>
>>
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