[Gofriends] GO tool for semantic similarity
Phillip Lord
phillip.lord at newcastle.ac.uk
Mon Oct 13 07:34:14 PDT 2008
>>>>> "IF" == Iddo Friedberg <idoerg at gmail.com> writes:
IF> There are various measures of semantic similarity using the GO
IF> DAG. The most commonly used is Lord's:
IF> http://bioinformatics.oxfordjournals.org/cgi/content/abstract/19/10/1275
IF> But there are others. See the citing papers.
...which I borrowed from Philip Resnik who applied it to word net.
Alas, I never managed to produce a website which did this. It's hard to
do this sort of thing as a service without the infrastructure (well,
that's my excuse).
I think that there is an implementation in bioconductor (the R based
stats package). There may be others.
Phil
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