[Ontology-editors] [Software-group] Preparing for GO BP MF links

[Chris Mungall]

On Dec 2, 2008, at 12:23 PM, Stoddard, Alexander wrote:

> As RGD prepares for the upcoming changes to GO scheduled for Feb 9th
> 2009 I would be grateful if the group would check my assumptions.
>
> Are the following correct?
>
> - The only intra-ontology links added on Feb 9th will be regulates
> relationships between function and process

Correct



>
> - No has_part relationships will go live on Feb 9th

Correct

> - The best file for testing purposes (combining the new relationships
> with existing ones) is: go_regtest_withPosNeg_withPF_noXP.obo found at
> ftp://ftp.geneontology.org/pub/go/scratch/regulates_relations_examples/g
> o_regtest_withPosNeg_withPF_noXP.obo

Correct

All as announced on gofriends, subject line:

Re: [Gofriends] SECOND ANNOUNCEMENT: Additional inter- and intra- 
ontology 'regulates' links in the GO coming

(but it's always good to check)

> Is there a timeline for the introduction of other ontology changes  
> such
> as "has_part" relationships?

There is no firm timeline yet.

>
> Kind regards,
> Alex Stoddard
> RGD Developer
>
>
>
>
> _______________________________________________
> Software-group mailing list
> Software-group at geneontology.org
> http://fafner.stanford.edu/mailman/listinfo/software-group
>