[Ontology-editors] obo-edit2

[Midori Harris]

Just to confirm, and cc the rest of the ontology editors ... yes, keep 
using OE 1.101 for another day or two, and watch for email from me. We're 
planning to do this in two steps:

  1. I'll call for an editing freeze so we can have a controlled small 
number of changes to test the pipeline for propagating all the other 
copies of the GO file.

  2. When that goes fine (as I'm sure it will), I'll send another email 
saying we're ready to use OE2.0. Then we should leave the created_by and 
creation_date tags in the file when we commit.

Cheers,
Midori

On Tue, 7 Apr 2009, Amina Abdullah wrote:

> Hi Donghui and Tanya,
> OBO-Edit2.0 will be out later today. Midori will test editing in OE2 and 
> check-in the file into cvs. She will then send out an email notifying 
> everyone to switch to OE2 and set a deadline for the switch.
> I'll keep you all posted too. We discussed this at the OEWG meeting today and 
> Jen will be posting the minutes to the wiki tomorrow.
> Thanks,
> Amina
>
[snip]

>> 
>> On Apr 7, 2009, at 4:05 PM, Tanya Berardini wrote:
>> 
>> Until OE2 is official for GO, please do the following if you edit in OE2 
>> and save the file.
>> 
>> 1. open the same file in OE1 and save under a different name.
>> 2. Strip the creation_date and created_by tags from the file
>> 
>> grep -v created_by gene_ontology_write.YOUR_VERSION | grep -v creation_date 
>> > gene_ontology_write.YOUR_VERSION_2
>> 
>> then you can
>> 
>> mv gene_ontology_write.YOUR_VERSION_2 gene_ontology_write.obo
>> 
>> 3. cvs diff and cvs commit as usual
>> 
>> Tanya
>>