[Ontology-editors] marking xp terms

Jennifer Deegan (nee Clark) jdeegan at ebi.ac.uk
Thu Apr 9 07:57:07 PDT 2009


Hi,

Has anybody come up with any cunning schemes for marking which terms 
they have checked in the cross product file?

I am working through bp-self in OE2 just now, checking the graph above 
the term that has a logical definition in the xp file. I started by 
putting '!!' on the end of the term name in the xp text file to mark the 
terms I had checked. I planned then to reload all the files and do a 
search on 'has is_intersection' AND NOT 'has name ends_with !!'. 
However, when I load the files, the version of the term names in the 
live file overwrites the version in the xp file and the !! is lost. If I 
load the files in the opposite order then it should solve this problem, 
but then I would have no way of noticing those terms in the live file 
that have changed their name since my xp file was made (quite a lot of 
them going by experience so far.)

It's hard to mark these even if I mark with dbxrefs in OBO-Edit and then 
save out and filter to regenerate my xp file, as the dbxrefs to not go 
in there.

Is there any other way to mark a term name that would not be overwritten 
by the live file version of the term name?

Thanks,

Jen


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