[Ontology-editors] organization & biogenesis

Midori Harris midori at ebi.ac.uk
Mon Apr 27 07:25:28 PDT 2009


Hi,

I'm revisiting the 'cellular component biogenesis' branch -- Val has just 
asked about 'fungal-type cell wall biogenesis' in SF 2781967, so this 
seems like a good time to deal with the cell wall terms generally.

As I understand it, we agreed (during or around the GOC meeting) to use 
'macromolecule' in the name of the 'parts synthesis' part of CC 
biogenesis, i.e. to add a term for 'cellular component macromolecule 
biosynthesis'. I'd like to get on with adding the generic 'CC 
macromolecule biosynthesis' term and making sure other terms are correctly 
placed under it. At present, there aren't very many other than the cell 
wall terms, so the main things to do are:

  - add CC macromolecule biosynthetic process
  - rename GO:0044038 to 'cell wall macromolecule biosynthetic process'; 
also rename children if necessary
  - add and remove relationships as needed (at present there are some TPVs 
involving some of the glucan biosynthesis terms)

Any comments, or any objections to my just tackling it this week?

cheers,
m


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