[Ontology-editors] organization & biogenesis

[David Hill]

Hi Midori,

This is what I remember too. Some of the current children of 
macromolecule biosynthetic process might have to be looked at. Go for it.

David

Midori Harris wrote:
> Hi,
>
> I'm revisiting the 'cellular component biogenesis' branch -- Val has 
> just asked about 'fungal-type cell wall biogenesis' in SF 2781967, so 
> this seems like a good time to deal with the cell wall terms generally.
>
> As I understand it, we agreed (during or around the GOC meeting) to 
> use 'macromolecule' in the name of the 'parts synthesis' part of CC 
> biogenesis, i.e. to add a term for 'cellular component macromolecule 
> biosynthesis'. I'd like to get on with adding the generic 'CC 
> macromolecule biosynthesis' term and making sure other terms are 
> correctly placed under it. At present, there aren't very many other 
> than the cell wall terms, so the main things to do are:
>
>  - add CC macromolecule biosynthetic process
>  - rename GO:0044038 to 'cell wall macromolecule biosynthetic 
> process'; also rename children if necessary
>  - add and remove relationships as needed (at present there are some 
> TPVs involving some of the glucan biosynthesis terms)
>
> Any comments, or any objections to my just tackling it this week?
>
> cheers,
> m

-- 
David P. Hill, Ph.D.
Bioinformatics Scientist: Ontology Development
Gene Ontology Consortium
The Jackson Laboratory
www.geneontology.org
www.informatics.jax.org
tel:207-288-6430