[Ontology-editors] organization & biogenesis

Jane Lomax jane at ebi.ac.uk
Tue Apr 28 03:27:11 PDT 2009


That would be great - I can take it off my to-do list then!

thanks,

Jane

Midori Harris wrote:
> Hi,
>
> I'm revisiting the 'cellular component biogenesis' branch -- Val has 
> just asked about 'fungal-type cell wall biogenesis' in SF 2781967, so 
> this seems like a good time to deal with the cell wall terms generally.
>
> As I understand it, we agreed (during or around the GOC meeting) to 
> use 'macromolecule' in the name of the 'parts synthesis' part of CC 
> biogenesis, i.e. to add a term for 'cellular component macromolecule 
> biosynthesis'. I'd like to get on with adding the generic 'CC 
> macromolecule biosynthesis' term and making sure other terms are 
> correctly placed under it. At present, there aren't very many other 
> than the cell wall terms, so the main things to do are:
>
>  - add CC macromolecule biosynthetic process
>  - rename GO:0044038 to 'cell wall macromolecule biosynthetic 
> process'; also rename children if necessary
>  - add and remove relationships as needed (at present there are some 
> TPVs involving some of the glucan biosynthesis terms)
>
> Any comments, or any objections to my just tackling it this week?
>
> cheers,
> m


-- 
Dr Jane Lomax
GO Editorial Office
EMBL-EBI
Wellcome Trust Genome Campus
Hinxton
Cambridgeshire, UK
CB10 1SD

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