[Ontology-editors] organization & biogenesis

[Midori Harris]

OK, a big chunk is done now (to be committed before I go home) ... oof. 
Val will go over it with her usual fine-tooth comb and let me know what I 
missed, and what new terms she needs. But it won't hurt if any of you want 
to check it over too.

m

On Tue, 28 Apr 2009, Jane Lomax wrote:

> That would be great - I can take it off my to-do list then!
>
> thanks,
>
> Jane
>
> Midori Harris wrote:
>> Hi,
>> 
>> I'm revisiting the 'cellular component biogenesis' branch -- Val has just 
>> asked about 'fungal-type cell wall biogenesis' in SF 2781967, so this seems 
>> like a good time to deal with the cell wall terms generally.
>> 
>> As I understand it, we agreed (during or around the GOC meeting) to use 
>> 'macromolecule' in the name of the 'parts synthesis' part of CC biogenesis, 
>> i.e. to add a term for 'cellular component macromolecule biosynthesis'. I'd 
>> like to get on with adding the generic 'CC macromolecule biosynthesis' term 
>> and making sure other terms are correctly placed under it. At present, 
>> there aren't very many other than the cell wall terms, so the main things 
>> to do are:
>>
>>  - add CC macromolecule biosynthetic process
>>  - rename GO:0044038 to 'cell wall macromolecule biosynthetic process'; 
>> also rename children if necessary
>>  - add and remove relationships as needed (at present there are some TPVs 
>> involving some of the glucan biosynthesis terms)
>> 
>> Any comments, or any objections to my just tackling it this week?
>> 
>> cheers,
>> m
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>
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