[Ontology-editors] freeze for regulates links

[Jane Lomax]

Right - so gene_ontology_write.obo has the inter-ontology links too then?

Jane

Midori Harris wrote:
>> Ah, okay. So presumably gene_ontology_ext.obo is generated from 
>> gene_ontology_write.obo?
>
> yup
>
>> What happens if we need to add a new inter-ontology regulates link?
>
> Add it in gene_ontology_write.obo, and it will be automagically 
> propagated to gene_ontology_ext.obo and stripped from the other 
> gene_ontology_*.obo files.
>
> m
>
>>
>> Jane
>>
>>
>> Midori Harris wrote:
>>> gene_ontology_write.obo, same as before
>>>
>>> m
>>>
>>> On Thu, 19 Feb 2009, Jane Lomax wrote:
>>>
>>>> So which file should we be editing now?
>>>>
>>>> Jane
>>>>
>>>>
>>>>
>>>> Chris Mungall wrote:
>>>>>
>>>>> unfreeze.
>>>>>
>>>>> as if by magic... we have inter-ontology and intra-MF regulates 
>>>>> links!
>>>>>
>>>>> Enjoy.
>>>>>
>>>>> Remember, these will be invisible to most users for now, unless 
>>>>> they explicitly choose to load from gene_ontology_ext.obo. See 
>>>>> ontology/README for details
>>>>>
>>>>> We should post announcements once everyone has had a chance to look
>>>>>
>>>>> On Feb 17, 2009, at 4:19 PM, Chris Mungall wrote:
>>>>>
>>>>>> I'm freezing the ontology whilst I add the BP->MF and MF->MF 
>>>>>> regulates links. Should be done in a couple of hours, I'll 
>>>>>> announce the thaw then.
>>>>>> _______________________________________________
>>>>>> Ontology-editors mailing list
>>>>>> Ontology-editors at geneontology.org
>>>>>> http://fafner.stanford.edu/mailman/listinfo/ontology-editors
>>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Ontology-editors mailing list
>>>>> Ontology-editors at geneontology.org
>>>>> http://fafner.stanford.edu/mailman/listinfo/ontology-editors
>>>>
>>>>
>>>>
>>
>>
>>


-- 
Dr Jane Lomax
GO Editorial Office
EMBL-EBI
Wellcome Trust Genome Campus
Hinxton
Cambridgeshire, UK
CB10 1SD

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