[Ontology-editors] freeze for regulates links

[Harold Drabkin]

I can see the  BP reg MF in the graph viewer (show all). Cool.

hjd

Jane Lomax wrote:
> Huh - I think this might be strange OE behaviour. I can see the 
> regulates links for these terms in the parent editor but not in any of 
> the graph viewers. But on the plus side, I'm not experiencing any 
> slowdown!
>
> Jane
>
>
>
> Midori Harris wrote:
>> MF reg MF - GO:0005246
>>
>> BP reg MF - GO:0051340
>>
>> On Thu, 19 Feb 2009, Jane Lomax wrote:
>>
>>> Still can't see 'em. I'm looking at gene_ontology_write.obo -r 1.449.
>>>
>>> Perhaps it's just that I haven't found any - do you have some 
>>> example terms that definitely have the links?
>>>
>>> Jane
>>>
>>>
>>>
>>> Midori Harris wrote:
>>>> I've got the new relationships in gene_ontology_write.obo and 
>>>> gene_ontology_ext.obo.
>>>>
>>>> (Oh, nad the slowdown must have something to do with the graphy 
>>>> stuff -- with all three off, I'm finding beta54 about the same as 
>>>> before.)
>>>>
>>>> m
>>>>
>>>> On Thu, 19 Feb 2009, Jane Lomax wrote:
>>>>
>>>>> Hi Chris - I can't see any of the new links in 
>>>>> gene_ontology_ext.obo - did you take them out because of the OE 
>>>>> slowdown?
>>>>>
>>>>> cheers,
>>>>>
>>>>> Jane
>>>>>
>>>>> Chris Mungall wrote:
>>>>>>
>>>>>> unfreeze.
>>>>>>
>>>>>> as if by magic... we have inter-ontology and intra-MF regulates 
>>>>>> links!
>>>>>>
>>>>>> Enjoy.
>>>>>>
>>>>>> Remember, these will be invisible to most users for now, unless 
>>>>>> they explicitly choose to load from gene_ontology_ext.obo. See 
>>>>>> ontology/README for details
>>>>>>
>>>>>> We should post announcements once everyone has had a chance to look
>>>>>>
>>>>>> On Feb 17, 2009, at 4:19 PM, Chris Mungall wrote:
>>>>>>
>>>>>>> I'm freezing the ontology whilst I add the BP->MF and MF->MF 
>>>>>>> regulates links. Should be done in a couple of hours, I'll 
>>>>>>> announce the thaw then.
>>>>>>> _______________________________________________
>>>>>>> Ontology-editors mailing list
>>>>>>> Ontology-editors at geneontology.org
>>>>>>> http://fafner.stanford.edu/mailman/listinfo/ontology-editors
>>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> Ontology-editors mailing list
>>>>>> Ontology-editors at geneontology.org
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>>>>>
>>>>>
>>>>>
>>>
>>>
>>>
>
>

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