[Ontology-editors] GO_REF

Midori Harris midori at ebi.ac.uk
Tue Jan 27 03:17:35 PST 2009


OK, let's give it the rest of today for the USians to catch up, then I'll 
do it next time I'm editing (assuming they don't raise any objections).

m

On Tue, 27 Jan 2009, Jennifer Deegan (nee Clark) wrote:

> No, that sounds sensible to me.
>
> Jen
>
> Midori Harris wrote:
>> Any objection, then, to moving the GO_REF to the def dbxrefs?
>> 
>> m
>> 
>> On Tue, 27 Jan 2009, Jennifer Deegan (nee Clark) wrote:
>> 
>>> Hi,
>>> 
>>> I did a lot of the editing for the CNS meeting, but I didn't add these 
>>> comments. There were three other people editing, and they were Doug, 
>>> David, and a non-GO curator at MGI.
>>> 
>>> Jen
>>> 
>>> 
>>> Midori Harris wrote:
>>>> Short answer: I don't know ... it's from the CNS meeting, but I don't 
>>>> recall nitty-gritty about comment vs. dbxref. (ccing Doug because he's 
>>>> not on the list)
>>>> 
>>>> m
>>>> 
>>>> On Fri, 23 Jan 2009, Chris Mungall wrote:
>>>> 
>>>>> Why are these in the comments (where they need special code to parse) 
>>>>> rather than in the definition dbxref?
>>>>> 
>>>>> [Term]
>>>>> id: GO:0021518
>>>>> name: spinal cord commissural neuron specification
>>>>> namespace: biological_process
>>>>> def: "The process whereby a cell becomes capable of differentiating 
>>>>> autonomously into a commissural neuron in an environment that is neutral 
>>>>> with respect to the developmental pathway." [GOC:cls, GOC:dgh, GOC:dph, 
>>>>> GOC:jic, GOC:mtg_15jun06]
>>>>> comment: This term was added by GO_REF:0000021.
>>>>> is_a: GO:0048665 ! neuron fate specification
>>>>> relationship: part_of GO:0021528 ! commissural neuron differentiation in 
>>>>> the spinal cord
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>


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