[Ontology-editors] [Go] proposal to merge tRNA aminoacylation terms (fwd)

[David Hill]

I think the merge is separate from the F-P links, so go ahead and make 
the merge. We aren't up to this on the F-P links yet.

David

Midori Harris wrote:
> Yes, I understand that -- that's precisely what the plan has been for 
> weeks. The question was, are we ready to do it? And if so, who does 
> the editing? (I'm happy to but thought I'd see if you wanted to add it 
> to the other MF-BP work.)
>
> m
>
> On Wed, 24 Jun 2009, David Hill wrote:
>
>> Midori,
>>
>> If there are specific function terms that describe the specific amino 
>> acids, then these would just all become part_of the generic parent.
>>
>> David
>>
>> Midori Harris wrote:
>>> Hi,
>>>
>>> Remember this? When we left it, we'd pretty much agreed to merge the 
>>> amino-acid-specific process terms into the parent, as soon as we 
>>> could also make part_of
>>>
>>> Tanya & David - would these MF-BP links fit in with the ones you're 
>>> doing?
>>>
>>> m
>>>
>>> ---------- Forwarded message ----------
>>> Date: Thu, 2 Apr 2009 13:00:20 +0100 (BST)
>>> From: Midori Harris <midori at ebi.ac.uk>
>>> To: GO Mailing List <go at genome.stanford.edu>
>>> Subject: [Go] proposal to merge tRNA aminoacylation terms
>>>
>>> Dear GO,
>>>
>>> In SF 2723153, there is a proposal to merge the amino-acid-specific 
>>> tRNA aminoacylation terms with the corresponding general parent.
>>>
>>> For example, these two terms (and their siblings, omitted for 
>>> brevity) would be merged with the parent GO:0006418 tRNA 
>>> aminoacylation for protein translation:
>>>
>>>   GO:0006419 alanyl-tRNA aminoacylation
>>>   GO:0006420 arginyl-tRNA aminoacylation
>>>
>>> (The original request suggests obsoletion, but the proposal has been 
>>> altered to merging.)
>>>
>>> We would like to know whether there is broad support for this 
>>> change, so please reply or comment on the SF item to say whether you 
>>> think this is a good or bad idea.
>>>
>>> https://sourceforge.net/tracker/?func=detail&aid=2723153&group_id=36855&atid=440764 
>>>
>>> Thanks,
>>> Midori
>>> _______________________________________________
>>> Go mailing list
>>> Go at geneontology.org
>>> http://fafner.stanford.edu/mailman/listinfo/go
>>
>>

-- 
David P. Hill, Ph.D.
Bioinformatics Scientist: Ontology Development
Gene Ontology Consortium
The Jackson Laboratory
www.geneontology.org
www.informatics.jax.org
tel:207-288-6430