[Ontology-editors] [Go] proposal to merge tRNA aminoacylation terms (fwd)

[David Hill]

OK, then just assign it to Tanya or me. We will do it as we do our other 
SF items.

David

Midori Harris wrote:
> In the SF comments we were leaning toward doing the merge and the F-P 
> links at the same time (even though they don't have to be coupled), so 
> I could still wait to do the merge.
>
> m
>
> On Wed, 24 Jun 2009, David Hill wrote:
>
>> I think the merge is separate from the F-P links, so go ahead and 
>> make the merge. We aren't up to this on the F-P links yet.
>>
>> David
>>
>> Midori Harris wrote:
>>> Yes, I understand that -- that's precisely what the plan has been 
>>> for weeks. The question was, are we ready to do it? And if so, who 
>>> does the editing? (I'm happy to but thought I'd see if you wanted to 
>>> add it to the other MF-BP work.)
>>>
>>> m
>>>
>>> On Wed, 24 Jun 2009, David Hill wrote:
>>>
>>>> Midori,
>>>>
>>>> If there are specific function terms that describe the specific 
>>>> amino acids, then these would just all become part_of the generic 
>>>> parent.
>>>>
>>>> David
>>>>
>>>> Midori Harris wrote:
>>>>> Hi,
>>>>>
>>>>> Remember this? When we left it, we'd pretty much agreed to merge 
>>>>> the amino-acid-specific process terms into the parent, as soon as 
>>>>> we could also make part_of
>>>>>
>>>>> Tanya & David - would these MF-BP links fit in with the ones 
>>>>> you're doing?
>>>>>
>>>>> m
>>>>>
>>>>> ---------- Forwarded message ----------
>>>>> Date: Thu, 2 Apr 2009 13:00:20 +0100 (BST)
>>>>> From: Midori Harris <midori at ebi.ac.uk>
>>>>> To: GO Mailing List <go at genome.stanford.edu>
>>>>> Subject: [Go] proposal to merge tRNA aminoacylation terms
>>>>>
>>>>> Dear GO,
>>>>>
>>>>> In SF 2723153, there is a proposal to merge the 
>>>>> amino-acid-specific tRNA aminoacylation terms with the 
>>>>> corresponding general parent.
>>>>>
>>>>> For example, these two terms (and their siblings, omitted for 
>>>>> brevity) would be merged with the parent GO:0006418 tRNA 
>>>>> aminoacylation for protein translation:
>>>>>
>>>>>   GO:0006419 alanyl-tRNA aminoacylation
>>>>>   GO:0006420 arginyl-tRNA aminoacylation
>>>>>
>>>>> (The original request suggests obsoletion, but the proposal has 
>>>>> been altered to merging.)
>>>>>
>>>>> We would like to know whether there is broad support for this 
>>>>> change, so please reply or comment on the SF item to say whether 
>>>>> you think this is a good or bad idea.
>>>>>
>>>>> https://sourceforge.net/tracker/?func=detail&aid=2723153&group_id=36855&atid=440764 
>>>>> Thanks,
>>>>> Midori
>>>>> _______________________________________________
>>>>> Go mailing list
>>>>> Go at geneontology.org
>>>>> http://fafner.stanford.edu/mailman/listinfo/go
>>>>
>>>>
>>
>>

-- 
David P. Hill, Ph.D.
Bioinformatics Scientist: Ontology Development
Gene Ontology Consortium
The Jackson Laboratory
www.geneontology.org
www.informatics.jax.org
tel:207-288-6430