[Ontology-editors] problem with obo file

[Midori Harris]

I've fixed these and will commit later today.

I'm not bothered which list these reports go to, since I'm on both and 
therefore will see them either way (and I'll probably do most of the 
fixes, which is fine).

m

On Mon, 29 Jun 2009, Chris Mungall wrote:

>
> This can be sent to go-editors if people prefer
>
> I'm running the checks as a standalone cron in berkeley until we integrate 
> this into production
>
> It's failing on the ascii check below - you cant actually see the error from 
> the report since mail loses the non-ascii character, but this should be 
> obvious if you look at the obo file or run the check script yourself
>
> don't respond to the email address the report originates from, I won't get it
>
> On Jun 29, 2009, at 3:52 PM, Chris Mungall wrote:
>
>> ERROR: ascii-check: Line: xref: Reactome:75142 "Activation of  Effector 
>> Caspases"
>> ERROR: ascii-check: Line: xref: Reactome:170834 "Signaling  by TGF beta"
>> ERROR: ascii-check: Line: xref: Reactome:407546 "Signaling  by TGF beta"
>> ERROR: ascii-check: Line: xref: Reactome:426215 "Signaling  by TGF beta"
>> ERROR: ascii-check: Line: xref: Reactome:441594 "Signaling  by TGF beta"
>> ERROR: ascii-check: Line: xref: Reactome:459500 "Signaling  by TGF beta"
>> ERROR: ascii-check: Line: xref: Reactome:469278 "Signaling  by TGF beta"
>> ERROR: ascii-check: Line: xref: Reactome:407953 "Death Receptor 
>> Signalling"
>> ERROR: ascii-check: Line: xref: Reactome:426606 "Death Receptor 
>> Signalling"
>> ERROR: ascii-check: Line: xref: Reactome:441974 "Death Receptor 
>> Signalling"
>> ERROR: ascii-check: Line: xref: Reactome:460074 "Death Receptor 
>> Signalling"
>> ERROR: ascii-check: Line: xref: Reactome:73887 "Death Receptor  Signalling"
>> ERROR: ascii-check: Line: xref: Reactome:168276 " NS1 Mediated Effects on 
>> Host Pathways"
>> ERROR: ascii-check: Line: xref: Reactome:396793 "Dehalogenation of the 
>> poly-halogenated hydrocarbon Halothane to form the acylhalide 
>> Trifluoroacetlychloride and  hydrogen bromide"
>> ERROR: ascii-check: Line: xref: Reactome:416365 "Dehalogenation of the 
>> poly-halogenated hydrocarbon Halothane to form the acylhalide 
>> Trifluoroacetlychloride and  hydrogen bromide"
>> ERROR: ascii-check: Line: xref: Reactome:489748 "Dehalogenation of the 
>> poly-halogenated hydrocarbon Halothane to form the acylhalide 
>> Trifluoroacetlychloride and  hydrogen bromide"
>> ERROR: ascii-check: Line: xref: Reactome:76475 "Dehalogenation of the 
>> poly-halogenated hydrocarbon Halothane to form the acylhalide 
>> Trifluoroacetlychloride and  hydrogen bromide"
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>
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